BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034F09SP1|AL429935
(833 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1762 1640 0.0
>3x_Contig1762
Length = 22098
Score = 1640 bits (826), Expect = 0.0
Identities = 830/833 (99%)
Strand = Plus / Plus
Query: 1 agtcccatacgtccttctatactttatttttgataagtatatattcctatgagagaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1819 agtcccatacgtccttctatactttatttttgataagtatatattcctatgagagaatat 1878
Query: 61 aaatatgggtatatgatctatttcgaactaatatacaagattttgatatatttcatgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1879 aaatatgggtatatgatctatttcgaactaatatacaagattttgatatatttcatgttt 1938
Query: 121 tcttgacgcacattaaaaagttgtcttcttaccttgcgatggcacaatggctgcagatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1939 tcttgacgcacattaaaaagttgtcttcttaccttgcgatggcacaatggctgcagatcc 1998
Query: 181 tctttgagcagaagccaatgcaacactacttttcaaacgattgtkagaatccttgtgaga 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1999 tctttgagcagaagccaatgcaacactacttttcaaacgattgttagaatccttgtgaga 2058
Query: 241 tggttgtctattggaataggatggtgcacgtctttccctaattggtggtggtgctgctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2059 tggttgtctattggaataggatggtgcacgtctttccctaattggtggtggtgctgctga 2118
Query: 301 tgatgacggttgagtcgtctttatgtcaaatgatggcttccttggttccctggcatctaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2119 tgatgacggttgagtcgtctttatgtcaaatgatggcttccttggttccctggcatctaa 2178
Query: 361 ctcaggtctccttctcacttgtctctttgatctatcttcaccgtattccattctaatagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2179 ctcaggtctccttctcacttgtctctttgatctatcttcaccgtattccattctaatagg 2238
Query: 421 tctgcttgcaatctttctacaacttttatctttaagcgcattggtagcacctgtttcgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2239 tctgcttgcaatctttctacaacttttatctttaagcgcattggtagcacctgtttcgtc 2298
Query: 481 cttaaaatcgataaatgcaaaccctttacacttaccagtgtcttcgaaagtagccattct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2299 cttaaaatcgataaatgcaaaccctttacacttaccagtgtcttcgaaagtagccattct 2358
Query: 541 tatcctcataatttcaccacagtgttggaagtgcttcctcagtaggtcttcggtagtatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2359 tatcctcataatttcaccacagtgttggaagtgcttcctcagtaggtcttcggtagtatc 2418
Query: 601 aaacgacaaawtaccaacaaatagaattctggatggtgggttctttgatgcagcnactag 660
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2419 aaacgacaaattaccaacaaatagaattctggatggtgggttctttgatgcagctactag 2478
Query: 661 atcattcttatctggtcttccttcataactgccagcgttcttgatgagcaagtttcttcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2479 atcattcttatctggtcttccttcataactgccagcgttcttgatgagcaagtttcttcc 2538
Query: 721 gtttagtgcactttcactcaaaccaactacagcttccatttgcttctcagttttaaaatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2539 gtttagtgcactttcactcaaaccaactacagcttccatttgcttctcagttttaaaatc 2598
Query: 781 aatgtaagcaaaacctttatttctgagtttcttgttgtcattcttggtcaatg 833
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2599 aatgtaagcaaaacctttatttctgagtttcttgttgtcattcttggtcaatg 2651
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6623
Number of Sequences: 1807
Number of extensions: 6623
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 833
length of database: 10,358,551
effective HSP length: 16
effective length of query: 817
effective length of database: 10,329,639
effective search space: 8439315063
effective search space used: 8439315063
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)